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Student Publications
- Ramlall, V., Thangaraj, P. M., Meydan, C., Foox, J., Butler, D., Kim, J., May, B., De Freitas, J. K., Glicksberg, B. S., Mason, C. E., Tatonetti, N. P., & Shapira, S. D. (2020). Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection. Nature medicine, 26(10), 1609–1615.
- Ramlall, V., Thangaraj, P. M., Meydan, C., Foox, J., Butler, D., May, B., De Freitas, J. K., Glicksberg, B. S., Mason, C. E., Tatonetti, N. P., & Shapira, S. D. (2020). Identification of Immune complement function as a determinant of adverse SARS-CoV-2 infection outcome. medRxiv : the preprint server for health sciences, 2020.05.05.20092452.
- Thangaraj, P. M., Kummer, B. R., Lorberbaum, T., Elkind, M., & Tatonetti, N. P. (2020). Comparative analysis, applications, and interpretation of electronic health record-based stroke phenotyping methods. BioData mining, 13(1), 21.
- Ancker, J. S., Grossman, L. V., & Benda, N. C. (2020). Health Literacy 2030: Is It Time to Redefine the Term?. Journal of general internal medicine, 35(8), 2427–2430.
- Rogers, J. R., Mills, H., Grossman, L. V., Goldstein, A., & Weng, C. (2020). Understanding the nature and scope of clinical research commentaries in PubMed. Journal of the American Medical Informatics Association : JAMIA, 27(3), 449–456.
- Reading Turchioe, M., Grossman, L. V., Myers, A. C., Baik, D., Goyal, P., & Masterson Creber, R. M. (2020). Visual analogies, not graphs, increase patients' comprehension of changes in their health status. Journal of the American Medical Informatics Association : JAMIA, 27(5), 677–689.
- Reading Turchioe, M., Grossman, L. V., Myers, A. C., Pathak, J., & Creber, R. M. (2021). Correlates of Mental Health Symptoms Among US Adults During COVID-19, March-April 2020. Public health reports (Washington, D.C. : 1974), 136(1), 97–106.
- Gofshteyn, J. S., Yeshokumar, A. K., Jette, N., Thakur, K. T., Luche, N., Yozawitz, E., Varnado, S., Klenofsky, B., Tuohy, M. C., Ankam, J., Torres, S., Hesdorffer, D., Nelson, A., Wolf, S., McGoldrick, P., Yan, H., Basma, N., & Grinspan, Z. (2020). Clinical and electrographic features of persistent seizures and status epilepticus associated with anti-NMDA receptor encephalitis (anti-NMDARE). Epileptic disorders : international epilepsy journal with videotape, 22(6), 739–751.
- Savage, T. M., Shonts, B. A., Lau, S., Obradovic, A., Robins, H., Shaked, A., Shen, Y., & Sykes, M. (2020). Deletion of donor-reactive T cell clones after human liver transplant. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 20(2), 538–545.
- Bhattacharjee, S., Hamberger, F., Ravichandra, A., Miller, M., Nair, A., Affo, S., Filliol, A., Chin, L., Savage, T. M., Yin, D., Wirsik, N. M., Mehal, A., Arpaia, N., Seki, E., Mack, M., Zhu, D., Sims, P. A., Stanger, B. Z., Olive, K. P., Schmidt, T., … Schwabe, R. F. (2021). Tumor restriction by type I collagen opposes tumor-promoting effects of cancer-associated fibroblasts. The Journal of clinical investigation, 146987. Advance online publication.
- Fu, J., Zuber, J., Shonts, B., Obradovic, A., Wang, Z., Frangaj, K., Meng, W., Rosenfeld, A. M., Waffarn, E. E., Liou, P., Lau, S. P., Savage, T. M., Yang, S., Rogers, K., Danzl, N. M., Ravella, S., Satwani, P., Iuga, A., Ho, S. H., Griesemer, A., … Sykes, M. (2021). Lymphohematopoietic graft-versus-host responses promote mixed chimerism in patients receiving intestinal transplantation. The Journal of clinical investigation, 131(8), e141698.
- Broyde, J., Simpson, D. R., Murray, D., Paull, E. O., Chu, B. W., Tagore, S., Jones, S. J., Griffin, A. T., Giorgi, F. M., Lachmann, A., Jackson, P., Sweet-Cordero, E. A., Honig, B., & Califano, A. (2021). Oncoprotein-specific molecular interaction maps (SigMaps) for cancer network analyses. Nature biotechnology, 39(2), 215–224.
- Habal, M. V., Miller, A., Rao, S., Lin, S., Obradovic, A., Khosravi-Maharlooei, M., See, S. B., Roy, P., Shihab, R., Ho, S. H., Marboe, C. C., Naka, Y., Takeda, K., Restaino, S., Han, A., Mancini, D., Givertz, M., Madsen, J. C., Sykes, M., Addonizio, L. J., … Zorn, E. (2021). T cell repertoire analysis suggests a prominent bystander response in human cardiac allograft vasculopathy. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 21(4), 1465–1476.
- Podestà, M. A., Binder, C., Sellberg, F., DeWolf, S., Shonts, B., Ho, S. H., Obradovic, A., Waffarn, E., Danzl, N., Berglund, D., & Sykes, M. (2020). Siplizumab selectively depletes effector memory T cells and promotes a relative expansion of alloreactive regulatory T cells in vitro. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 20(1), 88–100.
- Savage, T. M., Shonts, B. A., Lau, S., Obradovic, A., Robins, H., Shaked, A., Shen, Y., & Sykes, M. (2020). Deletion of donor-reactive T cell clones after human liver transplant. American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 20(2), 538–545.
- Khosravi-Maharlooei, M., Li, H., Hoelzl, M., Zhao, G., Ruiz, A., Misra, A., Li, Y., Teteloshvili, N., Nauman, G., Danzl, N., Ding, X., Pinker, E. Y., Obradovic, A., Yang, Y. G., Iuga, A., Creusot, R. J., Winchester, R., & Sykes, M. (2021). Role of the thymus in spontaneous development of a multi-organ autoimmune disease in human immune system mice. Journal of autoimmunity, 119, 102612.
- Ager, C. R., Obradovic, A. Z., Arriaga, J. M., Chaimowitz, M. G., Califano, A., Abate-Shen, C., & Drake, C. G. (2021). Longitudinal Immune Profiling Reveals Unique Myeloid and T-cell Phenotypes Associated with Spontaneous Immunoediting in a Prostate Tumor Model. Cancer immunology research, 10.1158/2326-6066.CIR-20-0637. Advance online publication.
- Fu, J., Zuber, J., Shonts, B., Obradovic, A., Wang, Z., Frangaj, K., Meng, W., Rosenfeld, A. M., Waffarn, E. E., Liou, P., Lau, S. P., Savage, T. M., Yang, S., Rogers, K., Danzl, N. M., Ravella, S., Satwani, P., Iuga, A., Ho, S. H., Griesemer, A., … Sykes, M. (2021). Lymphohematopoietic graft-versus-host responses promote mixed chimerism in patients receiving intestinal transplantation. The Journal of clinical investigation, 131(8), e141698.
- Aggen, D. H., Ager, C. R., Obradovic, A. Z., Chowdhury, N., Ghasemzadeh, A., Mao, W., Chaimowitz, M. G., Lopez-Bujanda, Z. A., Spina, C. S., Hawley, J. E., Dallos, M. C., Zhang, C., Wang, V., Li, H., Guo, X. V., & Drake, C. G. (2021). Blocking IL1 Beta Promotes Tumor Regression and Remodeling of the Myeloid Compartment in a Renal Cell Carcinoma Model: Multidimensional Analyses. Clinical cancer research : an official journal of the American Association for Cancer Research, 27(2), 608–621
- Obradovic, A. Z., Dallos, M. C., Zahurak, M. L., Partin, A. W., Schaeffer, E. M., Ross, A. E., Allaf, M. E., Nirschl, T. R., Liu, D., Chapman, C. G., O'Neal, T., Cao, H., Durham, J. N., Guner, G., Baena-Del Valle, J. A., Ertunc, O., De Marzo, A. M., Antonarakis, E. S., & Drake, C. G. (2020). T-Cell Infiltration and Adaptive Treg Resistance in Response to Androgen Deprivation With or Without Vaccination in Localized Prostate Cancer. Clinical cancer research : an official journal of the American Association for Cancer Research, 26(13), 3182–3192.
- Montgomery, M. K., Kim, S. H., Dovas, A., Zhao, H. T., Goldberg, A. R., Xu, W., Yagielski, A. J., Cambareri, M. K., Patel, K. B., Mela, A., Humala, N., Thibodeaux, D. N., Shaik, M. A., Ma, Y., Grinband, J., Chow, D. S., Schevon, C., Canoll, P., & Hillman, E. (2020). Glioma-Induced Alterations in Neuronal Activity and Neurovascular Coupling during Disease Progression. Cell reports, 31(2), 107500.
- Kanner, S. A., Shuja, Z., Choudhury, P., Jain, A., & Colecraft, H. M. (2020). Targeted deubiquitination rescues distinct trafficking-deficient ion channelopathies. Nature methods, 17(12), 1245–1253.
- Jenewein, T., Kanner, S. A., Bauer, D., Hertel, B., Colecraft, H. M., Moroni, A., Thiel, G., & Kauferstein, S. (2020). The mutation L69P in the PAS domain of the hERG potassium channel results in LQTS by trafficking deficiency. Channels (Austin, Tex.), 14(1), 163–174.
- Weisberg, S. P., Connors, T., Zhu, Y., Baldwin, M., Lin, W. H., Wontakal, S., Szabo, P. A., Wells, S. B., Dogra, P., Gray, J. I., Idzikowski, E., Bovier, F., Davis-Porada, J., Matsumoto, R., Li Poon, M. M., Chait, M. P., Mathieu, C., Horvat, B., Decimo, D., Bitan, Z. C., … Farber, D. L. (2020). Antibody responses to SARS-CoV2 are distinct in children with MIS-C compared to adults with COVID-19. medRxiv : the preprint server for health sciences, 2020.07.12.20151068.
- Leal Santos, S., Stackmann, M., Muñoz Zamora, A., Mastrodonato, A., De Landri, A. V., Vaughan, N., Chen, B. K., Lanio, M., & Denny, C. A. (2021). Propranolol Decreases Fear Expression by Modulating Fear Memory Traces. Biological psychiatry, S0006-3223(21)00047-0. Advance online publication.
- Paik, D. H., & Farber, D. L. (2021). Influenza infection fortifies local lymph nodes to promote lung-resident heterosubtypic immunity. The Journal of experimental medicine, 218(1), e20200218.
- Paik, D. H., & Farber, D. L. (2021). Anti-viral protective capacity of tissue resident memory T cells. Current opinion in virology, 46, 20–26.
- Su, S., Begum, S., & Ezratty, E. J. (2020). An IFT20 mechanotrafficking axis is required for integrin recycling, focal adhesion dynamics, and polarized cell migration. Molecular biology of the cell, 31(17), 1917–1930.
- Dogra, P., Rancan, C., Ma, W., Toth, M., Senda, T., Carpenter, D. J., Kubota, M., Matsumoto, R., Thapa, P., Szabo, P. A., Li Poon, M. M., Li, J., Arakawa-Hoyt, J., Shen, Y., Fong, L., Lanier, L. L., & Farber, D. L. (2020). Tissue Determinants of Human NK Cell Development, Function, and Residence. Cell, 180(4), 749–763.e13.
- Dogra, P., Rancan, C., Ma, W., Toth, M., Senda, T., Carpenter, D. J., Kubota, M., Matsumoto, R., Thapa, P., Szabo, P. A., Li Poon, M. M., Li, J., Arakawa-Hoyt, J., Shen, Y., Fong, L., Lanier, L. L., & Farber, D. L. (2020). Tissue Determinants of Human NK Cell Development, Function, and Residence. Cell, 180(4), 749–763.e13.
- Groopman, E. E., Povysil, G., Goldstein, D. B., & Gharavi, A. G. (2020). Rare genetic causes of complex kidney and urological diseases. Nature reviews. Nephrology, 16(11), 641–656.
- Nestor, J. G., Marasa, M., Milo-Rasouly, H., Groopman, E. E., Husain, S. A., Mohan, S., Fernandez, H., Aggarwal, V. S., Ahram, D. F., Vena, N., Bogyo, K., Bomback, A. S., Radhakrishnan, J., Appel, G. B., Ahn, W., Cohen, D. J., Canetta, P. A., Dube, G. K., Rao, M. K., Morris, H. K., … Gharavi, A. G. (2020). Pilot Study of Return of Genetic Results to Patients in Adult Nephrology. Clinical journal of the American Society of Nephrology : CJASN, 15(5), 651–664.
- Hays, T., Groopman, E. E., & Gharavi, A. G. (2020). Genetic testing for kidney disease of unknown etiology. Kidney international, 98(3), 590–600.
- Li, Y., Groopman, E. E., D'Agati, V., Prakash, S., Zhang, J., Mizerska-Wasiak, M., Caliskan, Y., Fasel, D., Karnib, H. H., Bono, L., Omran, S. A., Sabban, E. A., Kiryluk, K., Caridi, G., Ghiggeri, G. M., Sanna-Cherchi, S., Scolari, F., & Gharavi, A. G. (2020). Type IV Collagen Mutations in Familial IgA Nephropathy. Kidney international reports, 5(7), 1075–1078.
- Dhindsa, R. S., Copeland, B. R., Mustoe, A. M., & Goldstein, D. B. (2020). Natural Selection Shapes Codon Usage in the Human Genome. American journal of human genetics, 107(1), 83–95.
- Dhindsa, R. S., Zoghbi, A. W., Krizay, D. K., Vasavda, C., & Goldstein, D. B. (2021). A Transcriptome-Based Drug Discovery Paradigm for Neurodevelopmental Disorders. Annals of neurology, 89(2), 199–211.
- Luo, K. L., Underwood, R. S., & Greenwald, I. (2020). Positive autoregulation of lag-1 in response to LIN-12 activation in cell fate decisions during C. elegans reproductive system development. Development (Cambridge, England), 147(18), dev193482.
- Luo, J. H., Liu, S., Tao, J., Ren, B. G., Luo, K., Chen, Z. H., Nalesnik, M., Cieply, K., Ma, T., Cheng, S. Y., Chen, Q., Michalopoulos, G. K., Nelson, J. B., Bhargava, R., Zhang, J., Ma, D., Jarrard, D., Pennathur, A., Luketich, J. D., DeFranco, D. B., … Yu, Y. P. (2021). Pten-NOLC1 fusion promotes cancers involving MET and EGFR signalings. Oncogene, 40(6), 1064–1076.
- Jimenez, J. C., Berry, J. E., Lim, S. C., Ong, S. K., Kheirbek, M. A., & Hen, R. (2020). Contextual fear memory retrieval by correlated ensembles of ventral CA1 neurons. Nature communications, 11(1), 3492.
- Singh-Moon, R. P., Park, S. Y., Song Cho, D. M., Vaidya, A., Marboe, C. C., Wan, E. Y., & Hendon, C. P. (2020). Feasibility of near-infrared spectroscopy as a tool for anatomical mapping of the human epicardium. Biomedical optics express, 11(8), 4099–4109.
- Frangieh, C. J., Melms, J. C., Thakore, P. I., Geiger-Schuller, K. R., Ho, P., Luoma, A. M., Cleary, B., Jerby-Arnon, L., Malu, S., Cuoco, M. S., Zhao, M., Ager, C. R., Rogava, M., Hovey, L., Rotem, A., Bernatchez, C., Wucherpfennig, K. W., Johnson, B. E., Rozenblatt-Rosen, O., Schadendorf, D., … Izar, B. (2021). Multimodal pooled Perturb-CITE-seq screens in patient models define mechanisms of cancer immune evasion. Nature genetics, 53(3), 332–341.
- Benoit, L. J., Holt, E. S., Teboul, E., Taliaferro, J. P., Kellendonk, C., & Canetta, S. (2020). Medial prefrontal lesions impair performance in an operant delayed nonmatch to sample working memory task. Behavioral neuroscience, 134(3), 187–197.
- Benoit, L. J., Travis, C., Swan Sein, A., Quiah, S. C., Amiel, J., & Gowda, D. (2020). Toward a Bias-Free and Inclusive Medical Curriculum: Development and Implementation of Student-Initiated Guidelines and Monitoring Mechanisms at One Institution. Academic medicine : journal of the Association of American Medical Colleges, 95(12S Addressing Harmful Bias and Eliminating Discrimination in Health Professions Learning Environments), S145–S149.
- Benoit, L. J., Holt, E. S., Teboul, E., Taliaferro, J. P., Kellendonk, C., & Canetta, S. (2020). Medial prefrontal lesions impair performance in an operant delayed nonmatch to sample working memory task. Behavioral neuroscience, 134(3), 187–197.
- McKetta, S. C., & Keyes, K. M. (2020). Trends in U.S. women's binge drinking in middle adulthood by socioeconomic status, 2006-2018. Drug and alcohol dependence, 212, 108026.
- Hatzenbuehler, M. L., Rutherford, C., McKetta, S., Prins, S. J., & Keyes, K. M. (2020). Structural stigma and all-cause mortality among sexual minorities: Differences by sexual behavior?. Social science & medicine (1982), 244, 112463.
- Prins, S. J., McKetta, S., Platt, J., Muntaner, C., Keyes, K. M., & Bates, L. M. (2021). The Serpent of Their Agonies: Exploitation as Structural Determinant of Mental Illness. Epidemiology (Cambridge, Mass.), 32(2), 303–309.
- McKetta, S., Morrison, C. N., & Keyes, K. M. (2021). Trends in US Alcohol Consumption Frequency During the First Wave of the SARS-CoV-2 Pandemic. Alcoholism, clinical and experimental research, 10.1111/acer.14575. Advance online publication.
- Kasela, S., Ortega, V. E., Martorella, M., Garudadri, S., Nguyen, J., Ampleford, E., Pasanen, A., Nerella, S., Buschur, K. L., Barjaktarevic, I. Z., Barr, R. G., Bleecker, E. R., Bowler, R. P., Comellas, A. P., Cooper, C. B., Couper, D. J., Criner, G. J., Curtis, J. L., Han, M. K., Hansel, N. N., … Christenson, S. A. (2021). Genetic and non-genetic factors affecting the expression of COVID-19-relevant genes in the large airway epithelium. Genome medicine, 13(1), 66.
- Skowronski, A. A., LeDuc, C. A., Foo, K. S., Goffer, Y., Burnett, L. C., Egli, D., & Leibel, R. L. (2020). Physiological consequences of transient hyperleptinemia during discrete developmental periods on body weight in mice. Science translational medicine, 12(524), eaax6629.
- Skowronski, A. A., LeDuc, C. A., Foo, K. S., Goffer, Y., Burnett, L. C., Egli, D., & Leibel, R. L. (2020). Physiological consequences of transient hyperleptinemia during discrete developmental periods on body weight in mice. Science translational medicine, 12(524), eaax6629.
- Zazhytska, M., Kodra, A., Hoagland, D. A., Fullard, J. F., Shayya, H., Omer, A., Firestein, S., Gong, Q., Canoll, P. D., Goldman, J. E., Roussos, P., tenOever, B. R., Overdevest, J. B., & Lomvardas, S. (2021). Disruption of nuclear architecture as a cause of COVID-19 induced anosmia. bioRxiv : the preprint server for biology, 2021.02.09.430314.
- Geiller, T., Vancura, B., Terada, S., Troullinou, E., Chavlis, S., Tsagkatakis, G., Tsakalides, P., Ócsai, K., Poirazi, P., Rózsa, B. J., & Losonczy, A. (2020). Large-Scale 3D Two-Photon Imaging of Molecularly Identified CA1 Interneuron Dynamics in Behaving Mice. Neuron, 108(5), 968–983.e9.
- Cummings, M. J., Baldwin, M. R., Abrams, D., Jacobson, S. D., Meyer, B. J., Balough, E. M., Aaron, J. G., Claassen, J., Rabbani, L. E., Hastie, J., Hochman, B. R., Salazar-Schicchi, J., Yip, N. H., Brodie, D., & O'Donnell, M. R. (2020). Epidemiology, clinical course, and outcomes of critically ill adults with COVID-19 in New York City: a prospective cohort study. Lancet (London, England), 395(10239), 1763–1770.
- Cummings, M. J., Baldwin, M. R., Abrams, D., Jacobson, S. D., Meyer, B. J., Balough, E. M., Aaron, J. G., Claassen, J., Rabbani, L. E., Hastie, J., Hochman, B. R., Salazar-Schicchi, J., Yip, N. H., Brodie, D., & O'Donnell, M. R. (2020). Epidemiology, clinical course, and outcomes of critically ill adults with COVID-19 in New York City: a prospective cohort study. medRxiv : the preprint server for health sciences, 2020.04.15.20067157.
- Rodriguez, V. A., Bhave, S., Chen, R., Pang, C., Hripcsak, G., Sengupta, S., Elhadad, N., Green, R., Adelman, J., Metitiri, K. S., Elias, P., Groves, H., Mohan, S., Natarajan, K., & Perotte, A. (2021). Development and validation of prediction models for mechanical ventilation, renal replacement therapy, and readmission in COVID-19 patients. Journal of the American Medical Informatics Association : JAMIA, ocab029. Advance online publication.
- Rodriguez, V. A., Tony, S., Thangaraj, P., Pang, C., Kalluri, K. S., Jiang, X., Ostropolets, A., RuiJun, C., Karthik, N., & Ryan, P. (2021). Phenotype Concept Set Construction from Concept Pair Likelihoods. AMIA ... Annual Symposium proceedings. AMIA Symposium, 2020, 1080–1089.
- Rodriguez, V. A., Bhave, S., Chen, R., Pang, C., Hripcsak, G., Sengupta, S., Elhadad, N., Green, R., Adelman, J., Metitiri, K. S., Elias, P., Groves, H., Mohan, S., Natarajan, K., & Perotte, A. (2021). Development and validation of prediction models for mechanical ventilation, renal replacement therapy, and readmission in COVID-19 patients. Journal of the American Medical Informatics Association : JAMIA, ocab029. Advance online publication.
- Maniatis, S., Petrescu, J., & Phatnani, H. (2021). Spatially resolved transcriptomics and its applications in cancer. Current opinion in genetics & development, 66, 70–77.
- Tomlinson, K. L., Lung, T., Dach, F., Annavajhala, M. K., Gabryszewski, S. J., Groves, R. A., Drikic, M., Francoeur, N. J., Sridhar, S. H., Smith, M. L., Khanal, S., Britto, C. J., Sebra, R., Lewis, I., Uhlemann, A. C., Kahl, B. C., Prince, A. S., & Riquelme, S. A. (2021). Staphylococcus aureus induces an itaconate-dominated immunometabolic response that drives biofilm formation. Nature communications, 12(1), 1399.
- Venkatesh, D., O'Brien, N. A., Zandkarimi, F., Tong, D. R., Stokes, M. E., Dunn, D. E., Kengmana, E. S., Aron, A. T., Klein, A. M., Csuka, J. M., Moon, S. H., Conrad, M., Chang, C. J., Lo, D. C., D'Alessandro, A., Prives, C., & Stockwell, B. R. (2020). MDM2 and MDMX promote ferroptosis by PPARα-mediated lipid remodeling. Genes & development, 34(7-8), 526–543.
- Venkatesh, D., O'Brien, N. A., Zandkarimi, F., Tong, D. R., Stokes, M. E., Dunn, D. E., Kengmana, E. S., Aron, A. T., Klein, A. M., Csuka, J. M., Moon, S. H., Conrad, M., Chang, C. J., Lo, D. C., D'Alessandro, A., Prives, C., & Stockwell, B. R. (2020). MDM2 and MDMX promote ferroptosis by PPARα-mediated lipid remodeling. Genes & development, 34(7-8), 526–543.
- Mishra, V., Re, D. B., Le Verche, V., Alvarez, M. J., Vasciaveo, A., Jacquier, A., Doulias, P. T., Greco, T. M., Nizzardo, M., Papadimitriou, D., Nagata, T., Rinchetti, P., Perez-Torres, E. J., Politi, K. A., Ikiz, B., Clare, K., Than, M. E., Corti, S., Ischiropoulos, H., Lotti, F., … Przedborski, S. (2020). Systematic elucidation of neuron-astrocyte interaction in models of amyotrophic lateral sclerosis using multi-modal integrated bioinformatics workflow. Nature communications, 11(1), 5579.
- Cerezo-Wallis, D., Contreras-Alcalde, M., Troulé, K., Catena, X., Mucientes, C., Calvo, T. G., Cañón, E., Tejedo, C., Pennacchi, P. C., Hogan, S., Kölblinger, P., Tejero, H., Chen, A. X., Ibarz, N., Graña-Castro, O., Martinez, L., Muñoz, J., Ortiz-Romero, P., Rodriguez-Peralto, J. L., Gómez-López, G., … Soengas, M. S. (2020). Midkine rewires the melanoma microenvironment toward a tolerogenic and immune-resistant state. Nature medicine, 26(12), 1865–1877.
- Gartrell-Corrado, R. D., Chen, A. X., Rizk, E. M., Marks, D. K., Bogardus, M. H., Hart, T. D., Silverman, A. M., Bayan, C. Y., Finkel, G. G., Barker, L. W., Komatsubara, K. M., Carvajal, R. D., Horst, B. A., Chang, R., Monod, A., Rabadan, R., & Saenger, Y. M. (2020). Linking Transcriptomic and Imaging Data Defines Features of a Favorable Tumor Immune Microenvironment and Identifies a Combination Biomarker for Primary Melanoma. Cancer research, 80(5), 1078–1087.
- Liu, Z., Filip, I., Gomez, K., Engelbrecht, D., Meer, S., Lalloo, P. N., Patel, P., Perner, Y., Zhao, J., Wang, J., Pasqualucci, L., Rabadan, R., & Willem, P. (2020). Genomic characterization of HIV-associated plasmablastic lymphoma identifies pervasive mutations in the JAK-STAT pathway. Blood cancer discovery, 1(1), 112–125.
- Hill, V. M., O'Connor, R. M., & Shirasu-Hiza, M. (2020). Tired and stressed: Examining the need for sleep. The European journal of neuroscience, 51(1), 494–508.
- Hobson, B. D., Kong, L., Hartwick, E. W., Gonzalez, R. L., & Sims, P. A. (2020). Elongation inhibitors do not prevent the release of puromycylated nascent polypeptide chains from ribosomes. eLife, 9, e60048.
- Ye, L. F., Reznik, E., Korn, J. M., Lin, F., Yang, G., Malesky, K., Gao, H., Loo, A., Pagliarini, R., Mikkelsen, T., Lo, D. C., deCarvalho, A. C., & Stockwell, B. R. (2020). Patient-derived glioblastoma cultures as a tool for small-molecule drug discovery. Oncotarget, 11(4), 443–451.
- Lieberman, O. J., Frier, M. D., McGuirt, A. F., Griffey, C. J., Rafikian, E., Yang, M., Yamamoto, A., Borgkvist, A., Santini, E., & Sulzer, D. (2020). Cell-type-specific regulation of neuronal intrinsic excitability by macroautophagy. eLife, 9, e50843.
- Lieberman, O. J., & Sulzer, D. (2020). The Synaptic Autophagy Cycle. Journal of molecular biology, 432(8), 2589–2604.
- Pigulevskiy, I., Lieberman, O. J., & Sulzer, D. (2020). Autophagic bias in the striatum. Autophagy, 16(6), 1148–1149.
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- MD-PhD students in bold
- *co-first author
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